Tools for high-performance genomic feature operations
BEDOPS is a suite of tools to address common questions raised in genomic studies---mostly with regard to overlap and proximity relationships between data sets. It aims to be scalable and flexible, facilitating the efficient and accurate analysis and management of large-scale genomic data.
BEDOPS provides tools that perform highly efficient and scalable Boolean and other set operations, statistical calculations, archiving, conversion and other management of genomic data of arbitrary scale. Tasks can be easily split by chromosome for distributing whole-genome analyses across a computational cluster.
- Website: https://github.com/bedops/bedops
- Licenses: GPL 2+
- Package source: gnu/packages/bioinformatics.scm
- Builds: See build status
- Issues: See known issues
bedops 2.4.41 as follows:
guix install email@example.com
Or install the latest version:
guix install bedops
You can also install packages in augmented, pure or containerized environments for development or simply to try them out without polluting your user profile. See the
guix shell documentation for more information.