bowtie1 1.3.0

Fast aligner for short nucleotide sequence reads

Bowtie is a fast, memory-efficient short read aligner. It aligns short DNA sequences (reads) to the human genome at a rate of over 25 million 35-bp reads per hour. Bowtie indexes the genome with a Burrows-Wheeler index to keep its memory footprint small: typically about 2.2 GB for the human genome (2.9 GB for paired-end).

Website: https://bowtie-bio.sourceforge.net/index.shtml
Licenses: Artistic License 2.0
Package source: gnu/packages/bioinformatics.scm
Builds: See build status
Issues: See known issues

Installation

Install bowtie1 1.3.0 as follows:

guix install bowtie1@1.3.0

Or install the latest version:

guix install bowtie1

You can also install packages in augmented, pure or containerized environments for development or simply to try them out without polluting your user profile. See the guix shell documentation for more information.