Java API for high-throughput sequencing data (HTS) formats
HTSJDK is an implementation of a unified Java library for accessing common file formats, such as SAM and VCF, used for high-throughput sequencing (HTS) data. There are also an number of useful utilities for manipulating HTS data.
- Website: https://samtools.github.io/htsjdk/
- Licenses: Expat
- Package source: gnu/packages/bioinformatics.scm
- Builds: See build status
- Issues: See known issues
java-htsjdk 2.10.1 as follows:
guix install firstname.lastname@example.org
Or install the latest version:
guix install java-htsjdk
You can also install packages in augmented, pure or containerized environments for development or simply to try them out without polluting your user profile. See the
guix shell documentation for more information.