r-champ 2.40.0

Chip analysis methylation pipeline for Illumina HumanMethylation450 and EPIC

The package includes quality control metrics, a selection of normalization methods and novel methods to identify differentially methylated regions and to highlight copy number alterations.

Outputs: out
Website: https://bioconductor.org/packages/ChAMP
Licenses: GPL 3
Package source: gnu/packages/bioconductor.scm
Builds: See build status
Issues: See known issues

Installation

Install r-champ 2.40.0 as follows:

guix install r-champ@2.40.0

Or install the latest version:

guix install r-champ

You can also install packages in augmented, pure or containerized environments for development or simply to try them out without polluting your user profile. See the guix shell documentation for more information.