r-dmrcate 3.4.0
Methylation array and sequencing spatial analysis methods
This is a package for de novo identification and extraction of differentially methylated regions (DMRs) from the human genome using Whole Genome Bisulfite Sequencing (WGBS) and Illumina Infinium Array (450K and EPIC) data. It provides functionality for filtering probes possibly confounded by SNPs and cross-hybridisation. It includes GRanges generation and plotting functions.
- Outputs:
out - Website: https://bioconductor.org/packages/DMRcate
- Licenses: GPL 3
- Package source: gnu/packages/bioconductor.scm
- Builds: See build status
- Issues: See known issues
Installation
Install r-dmrcate 3.4.0 as follows:
guix install r-dmrcate@3.4.0
Or install the latest version:
guix install r-dmrcate
You can also install packages in augmented, pure or containerized environments for development or simply to try them out without polluting your user profile. See the guix shell documentation for more information.