r-edger 4.4.2

EdgeR does empirical analysis of digital gene expression data

This package can do differential expression analysis of RNA-seq expression profiles with biological replication. It implements a range of statistical methodology based on the negative binomial distributions, including empirical Bayes estimation, exact tests, generalized linear models and quasi-likelihood tests. It be applied to differential signal analysis of other types of genomic data that produce counts, including ChIP-seq, SAGE and CAGE.

Outputs: out
Website: https://bioinf.wehi.edu.au/edgeR
Licenses: GPL 2+
Package source: gnu/packages/bioconductor.scm
Builds: See build status
Issues: See known issues

Installation

Install r-edger 4.4.2 as follows:

guix install r-edger@4.4.2

Or install the latest version:

guix install r-edger

You can also install packages in augmented, pure or containerized environments for development or simply to try them out without polluting your user profile. See the guix shell documentation for more information.