r-methylaid 1.42.0

Quality control of large Illumina DNA Methylation array data sets

This package provides a visual and interactive web application using RStudio's shiny package. Bad quality samples are detected using sample-dependent and sample-independent controls present on the array and user adjustable thresholds. In depth exploration of bad quality samples can be performed using several interactive diagnostic plots of the quality control probes present on the array. Furthermore, the impact of any batch effect provided by the user can be explored.

Outputs: out
Website: https://git.bioconductor.org/packages/MethylAid
Licenses: GPL 2+
Package source: gnu/packages/bioconductor.scm
Builds: See build status
Issues: See known issues

Installation

Install r-methylaid 1.42.0 as follows:

guix install r-methylaid@1.42.0

Or install the latest version:

guix install r-methylaid

You can also install packages in augmented, pure or containerized environments for development or simply to try them out without polluting your user profile. See the guix shell documentation for more information.