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r-refgenome

Gene and splice site annotation using annotation data from Ensembl and UCSC

This package contains functionality for importing and managing of downloaded genome annotation data from the Ensembl genome browser (European Bioinformatics Institute) and from the UCSC genome browser (University of California, Santa Cruz) and annotation routines for genomic positions and splice site positions.

Installation

Install the latest version of r-refgenome as follows:

guix install r-refgenome

Or install a particular version:

guix install r-refgenome@1.7.7

You can also install packages in augmented, pure or containerized environments for development or simply to try them out without polluting your user profile. See the guix shell documentation for more information.