r-ripseeker
Identifying protein-associated transcripts from RIP-seq experiments
This package infers and discriminates RIP peaks from RIP-seq alignments using two-state HMM with negative binomial emission probability. While RIPSeeker is specifically tailored for RIP-seq data analysis, it also provides a suite of bioinformatics tools integrated within this self-contained software package comprehensively addressing issues ranging from post-alignments processing to visualization and annotation.
- Versions: 1.26.0
- Website: https://bioconductor.org/packages/RIPSeeker
- Licenses: GPL 2
- Package source: gnu/packages/bioconductor.scm
- Builds: See build status
- Issues: See known issues
Installation
Install the latest version of r-ripseeker as follows:
guix install r-ripseeker
Or install a particular version:
guix install r-ripseeker@1.26.0
You can also install packages in augmented, pure or containerized environments for development or simply to try them out without polluting your user profile. See the guix shell documentation for more information.
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