r-saturn 1.16.0
Analysis of differential transcript usage for scRNA-seq applications
satuRn provides a framework for performing differential transcript usage analyses. The package consists of three main functions. The first function, fitDTU, fits quasi-binomial generalized linear models that model transcript usage in different groups of interest. The second function, testDTU, tests for differential usage of transcripts between groups of interest. Finally, plotDTU visualizes the usage profiles of transcripts in groups of interest.
- Outputs:
out - Website: https://github.com/statOmics/satuRn
- Licenses: Artistic License 2.0
- Package source: gnu/packages/bioconductor.scm
- Builds: See build status
- Issues: See known issues
Installation
Install r-saturn 1.16.0 as follows:
guix install r-saturn@1.16.0
Or install the latest version:
guix install r-saturn
You can also install packages in augmented, pure or containerized environments for development or simply to try them out without polluting your user profile. See the guix shell documentation for more information.