r-txdbmaker 1.6.0

Tools for making TxDb objects from genomic annotations

This package provides a set of tools for making TxDb objects from genomic annotations from various sources (e.g. UCSC, Ensembl, and GFF files). These tools allow the user to download the genomic locations of transcripts, exons, and CDS, for a given assembly, and to import them in a TxDb object. TxDb objects are implemented in the GenomicFeatures package, together with flexible methods for extracting the desired features in convenient formats.

Outputs: out
Website: https://bioconductor.org/packages/txdbmaker
Licenses: Artistic License 2.0
Package source: gnu/packages/bioconductor.scm
Builds: See build status
Issues: See known issues

Installation

Install r-txdbmaker 1.6.0 as follows:

guix install r-txdbmaker@1.6.0

Or install the latest version:

guix install r-txdbmaker

You can also install packages in augmented, pure or containerized environments for development or simply to try them out without polluting your user profile. See the guix shell documentation for more information.