r-tximport 1.34.0
Import and summarize transcript-level estimates for gene-level analysis
This package provides tools to import transcript-level abundance, estimated counts and transcript lengths, and to summarize them into matrices for use with downstream gene-level analysis packages. Average transcript length, weighted by sample-specific transcript abundance estimates, is provided as a matrix which can be used as an offset for different expression of gene-level counts.
- Outputs:
out - Website: https://bioconductor.org/packages/tximport
- Licenses: GPL 2+
- Package source: gnu/packages/bioconductor.scm
- Builds: See build status
- Issues: See known issues
Installation
Install r-tximport 1.34.0 as follows:
guix install r-tximport@1.34.0
Or install the latest version:
guix install r-tximport
You can also install packages in augmented, pure or containerized environments for development or simply to try them out without polluting your user profile. See the guix shell documentation for more information.