seqan

Library for nucleotide sequence analysis

SeqAn is a C++ library of efficient algorithms and data structures for the analysis of sequences with the focus on biological data. It contains algorithms and data structures for string representation and their manipulation, online and indexed string search, efficient I/O of bioinformatics file formats, sequence alignment, and more.

Versions: 3.0.3 · 2.4.0 · 1.4.2
Website: https://www.seqan.de
Licenses: Modified BSD
Package source: gnu/packages/bioinformatics.scm
Builds: See build status
Issues: See known issues

Installation

Install the latest version of seqan as follows:

guix install seqan

Or install a particular version:

guix install seqan@1.4.2

You can also install packages in augmented, pure or containerized environments for development or simply to try them out without polluting your user profile. See the guix shell documentation for more information.