Packages
GNU Guix provides 20427 packages transparently available as pre-built binaries. These pages provide a complete list of the packages. Our continuous integration system shows their current build status (updated December 6, 2022).
multiqc 1.10.1
Aggregate bioinformatics analysis reports
rust-bio 0.32.0
Bioinformatics library for Rust
rust-bio 0.33.0
Bioinformatics library for Rust
rust-bio 0.39.2
Bioinformatics library for Rust
avogadrolibs 1.93.0
Libraries for chemistry, bioinformatics, and related areas
bioparser 3.0.13
C++ library for parsing several formats in bioinformatics
bioruby 1.5.2
Ruby library, shell and utilities for bioinformatics
biosoup 0.10.0
C++ support library for bioinformatics tools
bpp-core 2.2.0-1.7d8bced
C++ libraries for Bioinformatics
bppsuite 2.2.0-1.c516147
Bioinformatics tools written with the Bio++ libraries
go-github-com-biogo-biogo 1.0.4
Bioinformatics library for Go
kentutils 302.0.0
Assorted bioinformatics utilities
python-scikit-bio 0.5.7
Data structures, algorithms and educational resources for bioinformatics
bandage 0.8.1
Bioinformatics Application for Navigating De novo Assembly Graphs Easily
bioawk 1.0
AWK with bioinformatics extensions
bioperl-minimal 1.7.0
Bioinformatics toolkit
libmaus2 2.0.786
Collection of data structures and algorithms useful for bioinformatics
python-biopython 1.73
Tools for biological computation in Python
python-biopython 1.76
Tools for biological computation in Python
r-biobroom 1.30.0
Turn Bioconductor objects into tidy data frames
r-biocgraph 1.60.0
Graph examples and use cases in Bioinformatics
armadillo 9.100.5
C++ linear algebra library
avogadro2 1.93.0
Advanced molecule editor
bio-locus 0.0.7
Tool for fast querying of genome locations
bpp-phyl 2.2.0-1.0c07167
Bio++ phylogenetic Library
bpp-popgen 2.2.0-1.e472bac
Bio++ population genetics library
bpp-seq 2.2.0-1.6cfa079
Bio++ sequence library
cwltool 3.1.20220119140128
Common Workflow Language reference implementation
graphviz 2.38.0-1.f54ac2c
Graph visualization software
graphviz 2.49.0
Graph visualization software
java-biojava-core 4.0.0
Core libraries of Java framework for processing biological data
java-biojava-core 4.2.11
Core libraries of Java framework for processing biological data
perl-czplib 1.0.5
Library for genomic analysis
prinseq 0.20.4
Preprocess sequence data in FASTA or FASTQ formats
r-arrayexpress 1.57.0
Building R objects from ArrayExpress datasets
r-biobtreer 1.10.0
Use biobtree tool from R
r-bseqsc 1.0-1.fef3f3e
Deconvolution of bulk sequencing experiments using single cell data
r-gosemsim 2.24.0
GO-terms semantic similarity measures
r-refgenome 1.7.7
Gene and splice site annotation using annotation data from Ensembl and UCSC
r-ripseeker 1.26.0
Identifying protein-associated transcripts from RIP-seq experiments
r-snapatac 2.0
Single nucleus analysis package for ATAC-Seq
r-webbioc 1.70.0
Bioconductor web interface
seqan 1.4.2
Library for nucleotide sequence analysis
seqan 2.4.0
Library for nucleotide sequence analysis
seqan 3.0.3
Library for nucleotide sequence analysis
smithlab-cpp 0.1.728a097
C++ helper library for functions used in Smith lab projects