freebayes

Haplotype-based variant detector

FreeBayes is a Bayesian genetic variant detector designed to find small polymorphisms, specifically SNPs (single-nucleotide polymorphisms), indels (insertions and deletions), MNPs (multi-nucleotide polymorphisms), and complex events (composite insertion and substitution events) smaller than the length of a short-read sequencing alignment.

Versions: 1.3.7
Website: https://github.com/freebayes/freebayes
Licenses: Expat
Package source: gnu/packages/bioinformatics.scm
Builds: See build status
Issues: See known issues

Installation

Install the latest version of freebayes as follows:

guix install freebayes

Or install a particular version:

guix install freebayes@1.3.7

You can also install packages in augmented, pure or containerized environments for development or simply to try them out without polluting your user profile. See the guix shell documentation for more information.

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