metabat
Reconstruction of single genomes from complex microbial communities
Grouping large genomic fragments assembled from shotgun metagenomic sequences to deconvolute complex microbial communities, or metagenome binning, enables the study of individual organisms and their interactions. MetaBAT is an automated metagenome binning software, which integrates empirical probabilistic distances of genome abundance and tetranucleotide frequency.
- Versions: 2.15
- Website: https://bitbucket.org/berkeleylab/metabat
- Licenses: non-copyleft
- Package source: gnu/packages/bioinformatics.scm
- Builds: See build status
- Issues: See known issues
Installation
Install the latest version of metabat as follows:
guix install metabat
Or install a particular version:
guix install metabat@2.15
You can also install packages in augmented, pure or containerized environments for development or simply to try them out without polluting your user profile. See the guix shell documentation for more information.
Badge code
You can use the following badge to inform users of metabat about the latest version available in Guix.
Example HTML:
<a href='https://packages.guix.gnu.org/packages/metabat'><img src='https://packages.guix.gnu.org/packages/metabat/badges/latest-version.svg' alt='Version in GNU Guix'></a>
Example Markdown:
[](https://packages.guix.gnu.org/packages/metabat)
Example Org:
[[https://packages.guix.gnu.org/packages/metabat][https://packages.guix.gnu.org/packages/metabat/badges/latest-version.svg]]