prinseq

Preprocess sequence data in FASTA or FASTQ formats

PRINSEQ is a bioinformatics tool to help you preprocess your genomic or metagenomic sequence data in FASTA or FASTQ formats. The tool is written in Perl and can be helpful if you want to filter, reformat, or trim your sequence data. It also generates basic statistics for your sequences.

Versions: 0.20.4
Website: https://prinseq.sourceforge.net/
Licenses: GPL 3+
Package source: gnu/packages/bioinformatics.scm
Builds: See build status
Issues: See known issues

Installation

Install the latest version of prinseq as follows:

guix install prinseq

Or install a particular version:

guix install prinseq@0.20.4

You can also install packages in augmented, pure or containerized environments for development or simply to try them out without polluting your user profile. See the guix shell documentation for more information.

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