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r-bgeecall

RNA-Seq present/absent gene expression calls generation

BgeeCall allows generating present/absent gene expression calls without using an arbitrary cutoff like TPM<1. Calls are generated based on reference intergenic sequences. These sequences are generated based on expression of all RNA-Seq libraries of each species integrated in Bgee.

Installation

Install the latest version of r-bgeecall as follows:

guix install r-bgeecall

Or install a particular version:

guix install r-bgeecall@1.22.0

You can also install packages in augmented, pure or containerized environments for development or simply to try them out without polluting your user profile. See the guix shell documentation for more information.

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