r-castor
Efficient phylogenetics on large trees
This tool supports analyses on massive phylogenies comprising up to millions of tips. Functions include pruning, rerooting, calculation of most-recent common ancestors, calculating distances from the tree root and calculating pairwise distances. In addition, this tool takes care of calculation of phylogenetic signal and mean trait depth (trait conservatism), ancestral state reconstruction and hidden character prediction of discrete characters, simulating and fitting models of trait evolution, fitting and simulating diversification models, dating trees, comparing trees, and reading/writing trees in Newick format.
- Versions: 1.8.3
- Website: https://cran.r-project.org/package=castor
- Licenses: GPL 2+
- Package source: gnu/packages/cran.scm
- Builds: See build status
- Issues: See known issues
Installation
Install the latest version of r-castor as follows:
guix install r-castor
Or install a particular version:
guix install r-castor@1.8.3
You can also install packages in augmented, pure or containerized environments for development or simply to try them out without polluting your user profile. See the guix shell documentation for more information.
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