r-champ
Chip analysis methylation pipeline for Illumina HumanMethylation450 and EPIC
The package includes quality control metrics, a selection of normalization methods and novel methods to identify differentially methylated regions and to highlight copy number alterations.
- Versions: 2.36.0
- Website: https://bioconductor.org/packages/ChAMP
- Licenses: GPL 3
- Package source: gnu/packages/bioconductor.scm
- Builds: See build status
- Issues: See known issues
Installation
Install the latest version of r-champ as follows:
guix install r-champ
Or install a particular version:
guix install r-champ@2.36.0
You can also install packages in augmented, pure or containerized environments for development or simply to try them out without polluting your user profile. See the guix shell documentation for more information.
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