r-edger
EdgeR does empirical analysis of digital gene expression data
This package can do differential expression analysis of RNA-seq expression profiles with biological replication. It implements a range of statistical methodology based on the negative binomial distributions, including empirical Bayes estimation, exact tests, generalized linear models and quasi-likelihood tests. It be applied to differential signal analysis of other types of genomic data that produce counts, including ChIP-seq, SAGE and CAGE.
- Versions: 4.4.2
- Website: https://bioinf.wehi.edu.au/edgeR
- Licenses: GPL 2+
- Package source: gnu/packages/bioconductor.scm
- Builds: See build status
- Issues: See known issues
Installation
Install the latest version of r-edger as follows:
guix install r-edger
Or install a particular version:
guix install r-edger@4.4.2
You can also install packages in augmented, pure or containerized environments for development or simply to try them out without polluting your user profile. See the guix shell documentation for more information.
Badge code
You can use the following badge to inform users of r-edger about the latest version available in Guix.
Example HTML:
<a href='https://packages.guix.gnu.org/packages/r-edger'><img src='https://packages.guix.gnu.org/packages/r-edger/badges/latest-version.svg' alt='Version in GNU Guix'></a>
Example Markdown:
[](https://packages.guix.gnu.org/packages/r-edger)
Example Org:
[[https://packages.guix.gnu.org/packages/r-edger][https://packages.guix.gnu.org/packages/r-edger/badges/latest-version.svg]]