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r-msa

Multiple sequence alignment

The msa package provides a unified R/Bioconductor interface to the multiple sequence alignment algorithms ClustalW, ClustalOmega, and Muscle. All three algorithms are integrated in the package, therefore, they do not depend on any external software tools and are available for all major platforms. The multiple sequence alignment algorithms are complemented by a function for pretty-printing multiple sequence alignments using the LaTeX package TeXshade.

Installation

Install the latest version of r-msa as follows:

guix install r-msa

Or install a particular version:

guix install r-msa@1.40.0

You can also install packages in augmented, pure or containerized environments for development or simply to try them out without polluting your user profile. See the guix shell documentation for more information.

Badge code

You can use the following badge to inform users of r-msa about the latest version available in Guix.

Example HTML:

<a href='https://packages.guix.gnu.org/packages/r-msa'><img src='https://packages.guix.gnu.org/packages/r-msa/badges/latest-version.svg' alt='Version in GNU Guix'></a>

Example Markdown:

[![Version in GNU Guix](https://packages.guix.gnu.org/packages/r-msa/badges/latest-version.svg)](https://packages.guix.gnu.org/packages/r-msa)

Example Org:

[[https://packages.guix.gnu.org/packages/r-msa][https://packages.guix.gnu.org/packages/r-msa/badges/latest-version.svg]]