r-screpertoire 1.12.0

Toolkit for single-cell immune receptor profiling

The scRepertoire package was built to process data derived from the 10x Genomics Chromium Immune Profiling for both TCR and Ig enrichment workflows and subsequently interacts with the popular Seurat and SingleCellExperiment R packages. It also allows for general analysis of single-cell clonotype information without the use of expression information. The package functions as a wrapper for Startrac and powerTCR R packages.

Website: https://bioconductor.org/packages/scRepertoire
Licenses: GPL 2
Package source: gnu/packages/bioconductor.scm
Builds: See build status
Issues: See known issues

Installation

Install r-screpertoire 1.12.0 as follows:

guix install r-screpertoire@1.12.0

Or install the latest version:

guix install r-screpertoire

You can also install packages in augmented, pure or containerized environments for development or simply to try them out without polluting your user profile. See the guix shell documentation for more information.