r-ucsc-utils
Low-level utilities to retrieve data from the UCSC Genome Browser
This package provides a set of low-level utilities to retrieve data from the UCSC Genome Browser. Most functions in the package access the data via the UCSC REST API but some of them query the UCSC MySQL server directly. Note that the primary purpose of the package is to support higher-level functionalities implemented in downstream packages like GenomeInfoDb or txdbmaker.
- Versions: 1.4.0
- Website: https://bioconductor.org/packages/UCSC.utils
- Licenses: Artistic License 2.0
- Package source: gnu/packages/bioconductor.scm
- Builds: See build status
- Issues: See known issues
Installation
Install the latest version of r-ucsc-utils as follows:
guix install r-ucsc-utils
Or install a particular version:
guix install r-ucsc-utils@1.4.0
You can also install packages in augmented, pure or containerized environments for development or simply to try them out without polluting your user profile. See the guix shell documentation for more information.
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